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First, can anyone of you suggest any astronomy website to learn the basics and then maybe explore them in Space Engine?
http://en.wikipedia.org/wiki/Main_Page
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Second, if there is a new version of SE available do I need to manually download it or it auto-updates?
No, it not auto updates, you must donwload it here: http://en.spaceengine.org/load/core/spaceengine_0971/2-1-0-18
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Third, is there an option to see the constellations (like say, stars connected by lines)?
No.
ENG
New site
India 
Russian Federation 